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Photon Counting Performance of Selected
Detectors
R3809U MCP-PMT
The TCSPC system response for a
Hamamatsu R3809U-50 MCP [27] is shown in fig. 20. The MCP was
illuminated with a femtosecond Ti:Sa laser, the response was measured
with an SPC-630 TCSPC module. A HFAC-26-01 preamplifier was used in
front of the SPC-630 CFD input. At an operating voltage of -3 kV the
FWHM (full width at half maximum) of the response is 28 ps.
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Logarithmic scale

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Fig. 20 R3809U, TCSPC instrument response. Operating
voltage-3kV, preamplifier gain 20dB, discriminator threshold - 80mV |
The response has a shoulder of
some 400 ps duration and about 1% of the peak amplitude. This shoulder
seems to be a general property of all MCPs and appears in all of these
devices. The width of the response can be reduced
to 25 ps by increasing the operating voltage to the maximum permitted
value of -3.4 kV. However, for most applications this is not recommended
for the following reason:
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Fig. 21 shows that count rates in excess of 2 MHz can be
reached. |
Fig. 22 shows the histogram of the time intervals
between the recorded photons. The count rate was about 10,000 photons
per second, the data were obtained with an SPC-830 in the ‘FIFO’ mode.
Interestingly, the R3809U is free of afterpulsing. |
As all MCP-PMTs, the R3809U allows
only a very small maximum output current. This sets a limit to the
maximum count rate that can be obtained from the device. The maximum
count rate depends on the MCP gain, i.e. of the supply voltage. The
count rate for the maximum output current of 100 nA as a function of the
supply voltage is shown in fig. 21. To keep the counting efficiency
constant the CFD threshold was adjusted to get a constant count rate at
a reference intensity that gave 20,000 counts per second. The R3809U
tubes have a relatively good SER pulse height distribution which seems
to be independent of the cathode type - possibly a result of the
independent manufacturing of the channel plate and the cathode.
Therefore a good counting efficiency can be achieved.
Due to the short TCSPC response
and the absence of afterpulses the R3809U is an ideal detector for TCSPC
fluorescence lifetime measurements, for TCSPC lifetime imaging, and for
combined lifetime / FCS or other correlation experiments. Recently
Hamamatsu announced the R3809U MCP with GaAs, GaAsP, and infrared
cathodes for up to 1700 nm. Although these MCPs are not as fast as the
versions with conventional cathodes they might be the ultimate detectors
for combined FCS / lifetime experiments.
The flipside is that MCPs are expensive and
can easily be damaged by overload. Therefore the R3809U should be
operated with a preamplifier that monitors the output current. If
overload conditions are to be expected, i.e. by the halogen or mercury
lamp of a scanning microscope, electronically driven shutters should be
used and high voltage shutdown should be accomplished to protect the
detector.
H7422
The H7422 incorporates a GaAs or GaAsP cathode PMT, a thermoelectric
cooler, and the high voltage power supply [28]. Hamamatsu delivers a
small OEM power supply to drive the cooler. However, we could not use
this power supply because it generated so much noise that photon
counting with the H7422 was not possible. Furthermore, we found that the
H7422 shuts down if the gain control voltage is changed faster that
about 0.1V / s. Apparently fast changes activate an internal overload
shutdown. Unfortunately the device can only be re-animated by cycling
the +12 V power supply.
Therefore we use the Becker & Hickl DCC-100 detector controller. It
drives the cooler and supplies the +12 V and a software-controlled gain
control voltage to the H7422. Furthermore, the DCC in conjunction with a
HFAC-26-1 preamplifier can be connected to shut down the gain of the
H7422 on overload. If the H7422 shuts down internally for any reason,
cycling the +12 V is only a mouse click into the DCC-100 operating
panel.
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Fig. 23: H7422-40, TCSPC Instrument response function. Gain control
voltage 0.9V (maximum gain), preamplifier 20dB, discriminator threshold
-200mV, -300mV, -400mV and -500mV, linear scale |
The FWHM of the system response is about 300 ps. There is a weak
secondary peak about 2.5 ns after the main peak, and a peak prior to the
main peak can appear at low discriminator thresholds.
The width of the
response does not depend appreciably of the discriminator threshold.
This is an indication that the response is limited by the intrinsic
speed of the semiconductor photocathode.
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Fig. 24:
H7422-40, Histogram of times between photons. Gain
control voltage 0.9V (red) 0.63V (blue).
Afterpulse probability increases with gain. |
Fig. 25: H7422-40, TCSPC Instrument response function. Gain
control voltage 0.63 V, preamplifier 20dB, discriminator threshold -30
mV, -50 mV, -70 mV |
The afterpulsing probability of the
H7422-40 can be seen from the histogram of the time intervals of the
photon (fig. 24). For maximum gain the afterpulse probability in the
first 1.5 µs is very high (fig. 24, red curve, control voltage 0.9V). If
the gain is reduced the afterpulse probability decreases considerably
(fig. 24, blue curve, 0.63V). The timing resolution does not decrease
appreciably at the reduced gain, fig. 25.
The H7422 is a good detector for TCSPC
applications when sensitivity has a higher priority than time
resolution. A typical application is TCSPC imaging with laser scanning
microscopes [18,29]. The high quantum efficiency helps to reduce
photobleaching which is the biggest enemy of lifetime imaging in
scanning microscopes.
The H7422 can also be used to investigate diffusion processes in
cells or conformational changes of dye / protein complexes by combined
FCS / lifetime spectroscopy. Although the accuracy in the time range
below 1.5 µs is impaired by afterpulsing, processes at longer time
scales can be efficiently recorded.
Another application of the H7422 is optical tomography with pulses
NIR lasers. Because the measurements are run in-vivo it is essential to
acquire a large number of photons in a short measurement time.
Particularly in the wavelength range above 800 nm the efficiency of
H7422-50 and -60 yields a considerable improvement compared to PMTs with
conventional cathodes.
H7421
The Hamamatsu H7421 is similar to the H7422 in that it contains a
GaAs or GaAsP cathode PMT, a thermoelectric cooler, and the high voltage
power supply. However, the output of the PMT is connected to a
discriminator that delivers TTL pulses. The output of the PMT is not
directly available, and the PMT gain and the discriminator threshold
cannot be changed. The module is therefore easy to use. However, because
the discriminator is not of the constant fraction type, the TCSPC timing
performance is by far not as good as for the H7422, see figure 26.
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Fig. 26: H7422-50, TCSPC response function for a count
rate of 30 kHz (blue) and 600 kHz (red),
logarithmic scale scale |
The FWHM is only 600 ps. Moreover, it increases for count rates above
some 100 kHz. Interestingly no such count rate dependence was found for
the H7422. Obviously the H7422 is a better solution if high time
resolution and high peak count rate is an issue.
H5783 and H5773 Photosensor Modules, PMH-100
The H5783 and
H5773 photosensor modules contain a small (TO9 size) PMT and the high
voltage power supply [30]. They come in different cathode and window
versions. A ‘P’ version selected for good pulse height distribution is
available for the bialkali and multialkali tubes. The typical TCSPC
response of a H5773P-0 is shown in fig. 27. The device was tested with a
650 nm diode laser of 80 ps pulse width. A HFAC-26-10 preamplifier was
used, and the response was recorded with an SPC-730 TCSPC module.
The response
function has a pre-peak about 1 ns before the main peak and an secondary
peak 2 ns after. The pre-peak is caused by low amplitude pulses,
probably from photoemission at the first dynode. It can be suppressed by
properly adjusting the discriminator threshold. The secondary peak is
independent of the discriminator threshold.
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Fig. 27: H5773P-0, TCSPC instrument response. Maximum gain,
preamplifier gain 20dB, discriminator threshold -100mV, -300mV and
-500mV, logarithmic scale |
The Becker & Hickl PMH-100 module contains a H5773P module, a 20 dB
preamplifier, and an overload indicator. The response is the same as for
the H5773P and a HFAC-26 amplifier. However, because the PMT and the
preamplifier are in the same housing, the PMH-100 has a superior noise
immunity. This results in an exceptionally low differential nonlinearity
in TCSPC measurements.
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Fig. 28:
H7422-40, Histogram of times between photons for
H5773P-0 (blue) and H5773P-1 (red). The
afterpulse probability is higher for
the -1 version. |
Fig.29: Dark count
rate for different H5773P-1 modules as a function of ambient
temperature. |
A histogram of the times between the photon pulses for the H5773 is
shown in fig. 28. The devices show relatively strong afterpulsing,
particularly the multialkali (-1) tubes. Taking into regards the small
cathode area of the devices the dark count rates are relatively high.
Selected devices with lower dark count rate are available.
The H5783, the H5773 and particularly the PMH-100 are easy to use,
rugged and fast detectors that can be used for TCSPC, multiscalers and
gated photon counting as well. In multiscaler applications the detectors
reach peak count rates of more that 150 MHz for a few 100 ns. The
detectors are not suitable for FCS or similar correlation experiments on
the time scale below 1 us.
R7400 and R5600 TO-8 PMTs
The R7400 and the older R5600 are bare tubes similar to that used in
the H5783 and H5773. There is actually no reason to use the bare tubes
instead of the complete photosensor module. However, for the bare tube
the voltage divider can be optimised for smaller TTS or improved
linearity at high count rate. The TTS width decreases with the square
root of the voltage between the cathode and the first dynode. It is
unknown how far the voltage can be increased without damage. A test tube
worked stable at 1 kV overall voltage with a three-fold increase of the
cathode-dynode voltage. The decrease of the response width is shown in
fig. 30.
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Fig. 30: R5600P-1, -1kV supply voltage: TCSPC response
for different voltage between cathode and first dynode.
photons. Blue, green and red: 1, 2 and 3 times nominal voltage |
Fig. 31:
H5773P-1, -1kV : Histogram of times between photons |
The afterpulse probability is the same as for the H5783 and H5773
photosensor modules (fig. 31). It is questionable whether the benefit of a slightly shorter response
compensates for the inconvenience of building a voltage divider and
using a high voltage power supply. However, if a large number of tubes
has to be used, i.e. in an optical tomography setup, using the R5600 or
R7400 can be reasonable.
R5900-L16 Multichannel PMT and PML-16 Multichannel
Detector Head
The Hamamatsu R5900-L16 is a multi-anode PMT with 16 channels in a
linear arrangement. In conjunction with a polychromator the detector can
be used for multi-wavelength detection. If the R5900-L16 is used with
steady-state and gated photon counters or with multiscalers 16 parallel
recording channels, e.g. two parallel Becker & Hickl PMM-328 modules are
required. For TCSPC application the multi-detector technique described
in [9] and [12-15] can be used. TCSPC multi-detector operation is
achieved by combining the photon pulses of all detector channels into
one common timing pulse line and generating a ‘channel’ signal which
indicates in which of the PMT channels a photon was detected. The Becker
& Hickl PML-16 detector head [13] contains the R5900-L16 tube and all
the required electronics.
The R5900-L16 has also been used with a separate routing device
[12,31]. However, in a setup like this noise pick-up from the
environment and noise from matching resistors and preamplifiers adds up
so that the timing performance is sub-optimal.
The TCSPC response of two selected channels of the PML-16 detector
head is shown in fig. 32. The response of a single channel of different
R5900-L16 is between 150 ps and 220 ps FWHM.
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Fig. 32: System response of two selected channels of
the PML-16 detector head |
The response is slightly different for the individual channels.
Fig. 33 shows the response for the 16 channels as sequence of curves and
as a colour-intensity plot. There is a systematic wobble in the delay of
response with the channel number. That means, for the analysis of
fluorescence lifetime measurements the instrument response function
(IRF) must be measured for all channels, and each channel must be
de-convoluted with its individual IRF.
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Fig. 33: System response of the PML-16 / R5900-L16 channels. Left
curve plot, right colour-intensity plot |
The data sheet of the R5900-L16 gives a channel crosstalk of only 3%.
There is certainly no reason to doubt about this value. However, in real
setup it is almost impossible to reach such a small crosstalk. If
crosstalk is an issue the solution is to use only each second channel of
the R5900-L16 [31]. If the PML-16 is used with only 8 channels, the data
of the unused channels should simply remain unused. If the R5900-L16 is
used outside the PML-16 the unused anodes should be terminated into
ground with 50 W .
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Fig. 34: R5900-L16, histogram of
times between photons. No afterpulsing was found. |
A histogram of the times between the photon pulses is shown in
fig. 34. No afterpulsing was found in the R5900-L16. It appears unlikely
that the absence of afterpulses was a special feature of the tested
device. The result is surprising because afterpulsing is detectable in
all PMTs of conventional design. It seems that the ‘metal channel’
design of the R5900 is really different from any conventional dynode
structure. That means, the R5900-L16 and the PML-16 detector head are
exceptionally suitable for combined multi-wavelength fluorescence
lifetime and FCS experiments. The absence of afterpulses can be a
benefit also in high repetition rate TCSPC measurements in that there is
no signal-dependent background. A R5900-L16 with a GaAs or GaAsP cathode
- although not announced yet - would be a great detector.
Side Window PMTs
Side window PMTs are rugged, inexpensive, and often have somewhat
higher cathode efficiency than front window PMTs. The broad TTS and the
long SER pulses make them less useful for TCSPC application or for
multiscaling or gated photon counting with high peak count rates.
However, side-window PMTs are used in many fluorescence spectrometers,
in femtosecond correlators and in laser scanning microscopes. If an
instrument like these has to be upgraded with a photon counting device
it can be difficult to replace the detector. Therefore, some typical
results for side window PMTs are given below.
The width and the shape of the TCSPC system response depend on the
size and the location of the illuminated spot on the photocathode. The
response for the R931 - a traditional 28 mm diameter PMT - for a spot
diameter of 3 mm is shown in Fig. 35.
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Fig. 35: R931, TCSPC system response for different spots on the
photocathode. Spot diameter 3mm |
By carefully selecting the spot on the
photocathode an acceptable response can be achieved [31,32]. A TCSPC
response width down to 112 ps FWHM has been reported [32]. This short
value was obtained by using single electron pulses in an extremely
narrow amplitude interval and illuminating a small spot near the edge of
the cathode.
The afterpulse probability for an R931 is
shown in Fig. 36. The afterpulse probability depends on the operating
voltage, and the afterpulses occur within a time interval of about 3 µs.
The high afterpulse probability does not only exclude correlation
measurements on the time scale below 3 µs, it can also result in a
considerable signal-dependent background in high repetition rate TCSPC
applications
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Fig. 36: R931,
histogram of times between photons.
Red - 900V, blue -1000V. The afterpulse probability increases with
voltage. |
Surprisingly, modern 13 mm diameter side
window tubes are not faster than the traditional 28 mm tubes. The TCSPC
response for a Hamamatsu R6350 is shown in fig. 37.
13 mm tubes are often used in the scanning
heads of laser scanning microscopes. It is difficult, if not impossible
to replace the side-window PMTs with faster detectors in these
instruments. Therefore it is often unavoidable to use the 13 mm side-on
tube for TCSPC lifetime imaging. Depending on the size and the location
of the illuminated spot an FWHM of 300 to 600 ps can be expected.
Although this is sufficient to determine the lifetimes of typical high
quantum yield chromophores, accurate FRET and fluorescence quenching
experiments require a higher time resolution.
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Fig. 37: R6350, TCSPC system response for illumination of full
cathode area |
CP 944 Channel Photomultiplier
The channel photomultipliers of Perkin
Elmer offer high gain and low dark count rates at a reasonable cost.
Unfortunately the devices have an extremely broad TTS. The TCSPC system
response to a 650nm diode laser is shown in fig. 38. The FWHM of the
response is of the order of 1.4 to 1.9 ns which is insufficient for
typical TCSPC applications.
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Fig. 38: CP 944 channel photomultiplier, TCSPC response. 650 nm,
count rate 1.5.105, high voltage -2.8 kV (red) and -2.9 kV (blue).
Full cathode illuminated |
However, the Perkin Elmer channel PMTs have high gain, a low dark count
rate and a surprisingly narrow pulse height distribution. This makes
them exceptionally useful for low intensity steady state photon counting
or multichannel scaling.
SPCM-AQR Single Photon
Avalanche Photodiode Module
The Perkin Elmer SPCM-AQR single photon
avalanche photodiode modules are well-known for their high quantum
efficiency in the near-infrared. Unfortunately the modules have a very
poor timing performance. The TCSPC response for a SPCM-AQR-12 (dark
count class <250 cps) is shown in fig. 39.
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Fig. 39: SPCM-AQR-12, TCSPC response. Left: 405nm, red 50 kHz, blue
500 kHz count rate. Right: 650 nm, red 50 kHz, blue 500 kHz count
rate |
The response was measured with a 405 nm
BDL-405 and a 650 nm ps diode laser of Becker & Hickl. The pulse width
of the lasers was 70 to 80 ps, i.e. much shorter that the detector
response. The measurements show that the TTS is not only much wider than
specified, there is also a considerable change with the wavelength, and,
still worse, with the count rate. Therefore the SPCM-AQR cannot be used
for fluorescence lifetime measurements.
Interestingly, an older SPCM-AQR had a
smaller count-rate dependence. Fig. 40 shows the TCSPC response of an
SPCM-AQR-14 (dark count class < 40 cps) manufactured in 1999. Although
the shift with the count rate is still too large for fluorescence
lifetime experiments, it is much smaller than for the new device.
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Fig. 41: SPCM-AQR-12, histogram of times between photons |
The afterpulse
probability of the SPCM-AQR is low enough for correlation experiments
down to a few 100 ns, fig. 41. An inconvenience
of the non-fibre version of the SPCM-AQR is that it is almost impossible
to attach it to an optical system without getting daylight into the
optical path. A standard optical adapter, e.g. a C-mount thread around
the photodiode, would simplify the optical setup considerably.
The conclusion is that
the SPCM-AQR is an excellent detector for fluorescence correlation
spectroscopy and high efficiency steady state photon counting but not
applicable to fluorescence lifetime measurements. This is disappointing,
particularly because state-of-the-art TCSPC techniques allow for
simultaneous FCS / lifetime measurements which are exceptionally useful
to investigate conformational changes in protein-dye complexes,
single-molecule FRET and diffusion processes in living cells. Currently
the only solution for these applications is to use PMT detectors, i.e.
the R3809U MCP, the H7422 or the R5900 which, of course, means to
sacrifice some efficiency.

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