FLIM Systems for Zeiss LSM 710 / 780 / 880 / 980
Laser Scanning Microscopes
An Overview
Abstract: The FLIM systems for the Zeiss
LSM 710 /780 / 880 / 980 family laser scanning microscopes are based on
bhs Multi-Dimensional TCSPC technique and 64 bit Megapixel technology [24, 31].
The systems feature single-photon sensitivity, excellent spatial and temporal resolution,
multi-exponential decay analysis, and short acquisition time. The systems are available
both for confocal and for multiphoton versions of the Zeiss LSMs. The recording
functions include basic FLIM recording, dual-channel FLIM,
excitation-wavelength-multiplexed FLIM, Z stack FLIM, time-series FLIM, spatial
and temporal mosaic FLIM, fluorescence lifetime-transient scanning (FLITS), and
phosphorescence lifetime imaging (PLIM). Multi-spectral FLIM is available by
adding a special detector to the system. Unlike other systems, the bh FLIM
systems are true molecular imaging systems. They use the fluorescence lifetime
not only as a contrast parameter but as an indicator of the molecular state of
the sample. This becomes possible by recording the complex multi-exponential
decay behaviour in the individual pixels and analysing the data with advanced
data analysis based on a combination of MLE-based time-domain analysis, phasor
analysis, and image segmentation functions. This brochure gives an overview of
the recording functions of the systems, the data analysis, and the application
to FRET measurements, autofluorescence FLIM of tissue, metabolic imaging, and time-resolved
recording of fast physiological processes. For complete information please see The
bh TCSPC Handbook [31], Handbook of the bh FLIM systems for the Zeiss LSM series
microscopes [2], and addendum for LSM 980 microscopes [3].
Becker & Hickl introduced their
multi-dimensional TCSPC technique in 1993. Fluorescence lifetime imaging
started in 1996 with applications in ophthalmology [90]. The first FLIM module
for laser scanning microscopes was introduced in 1998, bh FLIM systems for the
Zeiss LSM laser scanning microscopes are available since 2000 [21]. Since then, several new generations of
LSM family laser scanning microscopes, and several generations of bh FLIM
modules have been introduced. As a result, a wide variety of bh FLIM systems
and of FLIM system configurations are in use [24, 31]. The excitation light
source can be the Ti:Sapphire laser of a multiphoton microscope, a picosecond
diode laser attached to or integrated in the microscope, or a visible-range
tuneable solid state laser. The fluorescence light may be detected via a
confocal port of the scan head or via a non-descanned port of a multiphoton
microscope. Signals may be detected by one detector, simultaneously by two,
three, or four detectors, or by the 16 channels of a bh multi-wavelength
detector.
All bh FLIM systems are using highly
efficient GaAsP hybrid detectors, combining extremely high efficiency with
large active area, high counting speed, short acquisition time, high
time-resolution, and low background [31]. Moreover, the systems are using
64-bit data acquisition software [7], which enables the FLIM system to record
data at unprecedented pixel numbers and numbers of time channels. FLIM data
analysis is performed by bh's legendary SPCImage NG software [4, 32]. SPCImage
NG combines time-domain [32] and phasor [57] analysis, uses an MLE algorithm [32]
to fit the data, and runs the calculation on a GPU, resulting in data
processing times of no more than a few seconds. These features make the bh FLIM
systems superior to other systems even in entry-level FLIM applications. An
example of a high-resolution FLIM image is shown in Fig. 1.
Fig. 1: High-resolution FLIM image of BPAE cells, recorded by a bh TCSPC
FLIM system.
Most importantly, the bh FLIM systems are
based on a new understanding of FLIM in general. FLIM is no longer considered
simply a way of adding lifetime contrast to a microscopy image. It is
considered a technique of molecular imaging, i.e. of recording and visualising
molecular parameters and molecular processes in biological systems. Following
this idea, the FLIM systems are designed to observe several parameters of
biological system simultaneously, and in their mutual dependence. This is
supported by advanced FLIM functions, like multi-channel operation, excitation-wavelength-multiplexing,
time-series FLIM, Z stack FLIM, spatial and temporal Mosaic FLIM, multi-wavelength
FLIM, simultaneous fluorescence and phosphorescence lifetime imaging
(FLIM/PLIM), fluorescence lifetime-transient scanning (FLITS), and combinations of these techniques [31]. An overview on
the functions of the bh FLIM systems is given in Fig. 2. For a detailed description please see [2] and [3]. Please see also 'Application Notes' on
www.becker-hickl.com. Moreover, we recommend [24, 31, 38] as supporting literature.
Fig. 2: Overview on bh FLIM functions
Optical Architecture of the LSM 710 / 780 / 880 / 980
FLIM Systems
All bh TCSPC FLIM systems have in common
that the sample is excited by a pulsed laser of high repetition rate, scanned
at high pixel rate by the optical scanner of the microscope, and that the
fluorescence light is detected by one or several fast photon counting detectors
connected to the microscope. The FLIM data are recorded by building up a photon
distribution over the times of the photons in the laser pulse period and the
positions of the laser beam in the moment of the photon detection [24]. Typical
FLIM configurations for the LSM 710/780/880/980 family microscopes are
shown in Fig. 3 through Fig. 7.
Fig. 3 shows FLIM configurations for inverted
microscopes. The configuration on the left uses multiphoton excitation by a
femtosecond titanium-sapphire laser for excitation. The fluorescence light is
detected via a non-descanned detection (NDD) beam path. Typically, the light is
split in two spectral components by a Zeiss 'T Adapter', and detected by two
parallel detectors and TCSPC channels.
The configuration shown on the right uses confocal detection. The
sample is excited by one-photon excitation. The excitation source can either be
a single bh BDL-SMC or BDL-SMC laser or a bh 'Laser Hub' with four separate
BDS-SMC lasers. The fluorescence light is detected back through the confocal
beam path of the scanner and sent out of the scan head via an optical port. It
is split into two spectral channels by a bh beamsplitter module and fed into
two FLIM detectors. The single-photon pulses from the detectors are recorded by
two separate TCSPC channels of the FLIM system.
Fig. 3: LSM 710/780 family FLIM
systems, inverted microscopes. Left: Multiphoton-excitation FLIM with
non-descanned detection. Right: One-photon FLIM with confocal detection.
The detectors and detector assemblies for
the confocal port are compatible with those for the NDD port. That means the
detectors can be moved between the two port. It is also possible to attach
detectors to the both ports permanently. The desired pair of detectors can then
be selected in the SPCM data acquisition software.
Fig. 4 shows FLIM at an LSM 710/780/880/980 in the upright version.
The configuration on the left uses multiphoton excitation and non-descanned
detection, the configuration on the right uses one-photon excitation and
confocal detection.
Fig. 4: LSM 710/780/880/980 family
FLIM systems, upright microscopes. Left: Multiphoton-excitation FLIM with
non-descanned detection. Right: One-photon excitation FLIM with confocal
detection.
Multiphoton and the one-photon FLIM
configurations for the LSM 880 and LSM 980 with Airy-Scan detectors
are shown in Fig. 5, left and right. For the multiphoton system there is no
difference to the standard system. The Airy-Scan detector rests at the confocal
port and does not interfere with the FLIM detectors at the NDD port. In the
one-photon FLIM system the FLIM detectors are connected to a beam switch
between the scan head and the Zeiss Airy-Scan detector, see Fig. 5, right.
Fig. 5: LSM 880 / 980 FLIM systems, inverted microscopes. Left:
Multiphoton-excitation FLIM with non-descanned detection. Right: One-photon
excitation FLIM with confocal detection.
Standard bh FLIM systems for the
LSM 710, 780, 880, and 980 use the bh HPM‑100-40 or -06 hybrid detectors
[31, 27]. The systems are also available with the NIR versions of the HPM‑100
detectors [8, 9, 37]. LSMs which have a Zeiss BIG-2 detector [50] can use this
detector for FLIM [10, 31]. The
BIG‑2 is not as fast as the hybrid detectors, but it is well suitable for
standard FLIM applications. Systems with the BIG-2 detector are extremely easy
to be set up. In fact, BIG-2 multiphoton systems require nothing than the TCSPC
electronics and a few cable connections. One-photon ('Confocals') systems need
a bh ps diode laser or a bh Laser Hub connected to one of the laser inputs of
the LSM. The basic setup of the bh FLIM systems with the BIG-2 detector is
shown in Fig. 6.
Fig. 6: FLIM systems using the Zeiss BIG-2 detector. Left: Multiphoton
system. Right: Confocal system
The bh FLIM systems for Zeiss LSMs work
also with the bh MW-FLIM GaAsP multi-spectral FLIM detectors [31]. With these detectors, the FLIM systems
record in 16 spectral channels simultaneously. The optical configuration for multiphoton
multi-wavelength FLIM is shown in Fig. 7. The light is collected from an NDD
port by a fibre bundle. The light is dispersed spectrally, and detected by a bh
PML-16 GaAsP (16-channel) PMT module. Similarly, the multi-wavelength FLIM
detector assembly can be attached to the confocal port of the scan head.
Fig. 7: Multi-wavelength FLIM
Principle of Data Acquisition
Multi-Dimensional TCSPC
The bh FLIM systems use a combination of
bhs multidimensional time-correlated single-photon counting process with
confocal or multiphoton laser scanning [24, 31, 39, 40]. The principle is shown
in Fig. 8. The laser scanning microscope scans the sample with a focused beam
of a high-repetition-rate pulsed laser. Depending on the laser used, the
fluorescence in the sample can either be excited by one-photon or by multiphoton
excitation. The FLIM detector is attached either to a confocal or non-descanned
port of the laser scanning microscope [2, 21, 22, 23, 29, 31]. For every detected
photon the detector sends an electrical pulse into the TCSPC module. Moreover,
the TCSPC module receives scan clock signals (pixel, line, and frame clock)
from the scanning unit of the microscope.
Fig. 8: Multidimensional TCSPC architecture for FLIM
For each photon pulse from the detector, the TCSPC module determines
the time within the laser pulse sequence (i.e. in the fluorescence decay) and
the location within the scanning area, x and y. The photon times, t, and the
spatial coordinates, x and y, are used to address a memory in which the
detection events are accumulated. Thus, in the memory the distribution of the
photon density over x, y, and t builds up. The result is a data array representing
the pixel array of the scan, with every pixel containing a large number of time
channels with photon numbers for consecutive times after the excitation pulse.
In other words, the result is an image that contains a fluorescence decay curve
in each pixel [23, 24]. An
example is shown in Fig. 9.
Standard bh FLIM systems have two parallel channels of the
architecture shown in Fig. 8. The systems are therefore able to simultaneously
record images in two spectral channels. Because the channels are parallel the
systems deliver high throughput rates. Another advantage is that the channels
are independent. If one channel overloads the other one still delivers correct
data. Please see [2] and [31]
for details.
Fast Scanning Capability
It should be explicitly noted that FLIM by
multi-dimensional TCSPC does not require that the scanner stays in one pixel
until enough photons for a full fluorescence decay curve have been acquired. It
is only necessary that the total pixel time, over a large number of
subsequent frames, is large enough to record a reasonable number of photons per
pixel. Thus, TCSPC FLIM works even at the highest scan rates available in laser
scanning microscopes. At the pixel rates used in practice, the recording
process is more or less random: A photon is just stored in a memory location
according to its time in the fluorescence decay, its detector channel number,
and the location of the laser spot in the sample in the moment of detection.
Fig. 9: FLIM image of a Convallaria Sample, 2048x2048 pixels. Every pixel
contains a fluorescence decay curve resolved in a large number of time
channels.
Time Resolution
bh FLIM systems are unsurpassed in time
resolution. With the new SPC-180NX TCSPC modules the systems reach
unprecedented timing stability and time resolution. The electrical time
resolution is better than 3 ps (FWHM!), the timing stability better than
0.5 ps (RMS) [31, 36] (Fig. 10, left and middle). The time channel width
(often incorrectly termed 'time resolution') can be as short as 200
femtoseconds. With the new ultra-fast HPM‑100-06 detectors, the
instrument-response function for multiphoton systems is <20 ps (FWHM),
see Fig. 10, right. Timing performance on this level is entirely beyond of the
reach of any other FLIM system. With their fast detectors and negligible timing
jitter of the electronics, the systems accurately record ultra-fast fluorescence-decay
components which previously were unknown to even exist [44, 45, 46, 47].
Moreover, the time resolution does not degrade over extended acquisition times.
Extremely weak signals or signals from extremely fragile samples can therefore
be recorded successfully. The high stability in combination with the automatic
IRF-calibration function of SPCImage makes it unnecessary to re-calibrate the
system by repeated recording of the instrument-response function (IRF). This is
a significant advantage for practical use.
Fig. 10, left to right: Electrical IRF of SPC-180NX, IRF stability over 100 s,
IRF of multiphoton system with HPM-100-06
Multi-exponential-Decay Capability
Importantly, the bh FLIM technique delivers
the complete temporal profile of the decay functions in the pixels, not only an
average 'fluorescence lifetime' [24, 38]. This is extremely important for
biological applications, where the primary information often is in the
composition of the multi-exponential decay rather than in a simple lifetime.
Photon Efficiency for Single and Multiexponential Decay
In combination with bh's SPCImage NG data
analysis software, the bh FLIM systems feature near-ideal photon efficiency.
That means the number of photons needed to reach a given lifetime accuracy is
close to the theoretical minimum [6]. Due to the high time resolution and the
large number of time channels per pixel excellent photon efficiency is not only
achieved for single-exponential 'lifetimes' but also for the parameters of
multi-exponential decay functions. The ability to derive multi-exponential
decay parameters from the FLIM data is the basis of molecular imaging and other
high-end FLIM applications.
Acquisition Time
Near-ideal photon efficiency means that the
system reaches minimum acquisition time for a desired decay-parameter accuracy
at a given photon rate. That means the bh FLIM systems reach minimum
acquisition time under conditions where the emission rate is limited by the
photostability of the sample [6, 31]. This is the case in the majority of
molecular imaging applications.
Multi-Parameter Recording
The most intriguing feature of the bh FLIM
technique is the multi-dimensional nature of the recording process. bh FLIM
systems are able to record at several excitation wavelengths simultaneously,
record dynamic processes in live samples down to the millisecond range, record
FLIM and PLIM simultaneously, or record multi-spectral FLIM images. With these
capabilities, bh FLIM systems are ideal molecular-imaging systems, able to
observe several parameters of biological system simultaneously and in their
mutual dependence [31].
FCS and Single-Molecule Capabilities
The TCSPC module can also process the
photon data to obtain fluorescence-correlation data (FCS) data [31, 25], photon
counting histograms (PCH) or photon-counting-lifetime histograms. Moreover the
parameter-tagged single photon data can be stored in a file for off-line
processing by single-molecule spectroscopy techniques.
TCSPC Modules
Different
generations if the bh FLIM systems contain different TCSPC / FLIM modules.
Early bh FLIM systems used SPC-830 or SPC-150 modules. From 2016 on
SPC150 N and SPC-150 NX modules were used. The SPC-150 N, and,
especially, the SPC-150 NX achieve higher time resolution in combination
with ultra-fast hybrid detectors and femtosecond lasers. Recent systems use
either the SPC‑180 NX or the SPC-QC-104. The SPC-180 NX
delivers maximum time resolution with fast detectors and lasers, the SPC-QC has
lower time resolution but can record at extremely high count rates. Still, the
instrument response (IRF) of the SPC‑QC 104 is faster than the
pulse width of diode lasers and faster than the transit-time spread of most
detectors, see Fig. 12. Hence there is little difference in resolution for
confocal systems with diode lasers. For NLO systems with femtosecond lasers,
however, it can be the difference between easily detecting a fast decay
component and missing it.
Fig. 11: SPC-180 NX (left) and
SPC-QC-104 (right)
Fig. 12: Electrical IRF for SPC-180 NX (left) and SPC-QC 104
Lasers
Confocal FLIM
bh FLIM systems for the LSM 710, 780,
and 880 confocal microscopes had one or two ps diode lasers. These were
integrated in the hardware and software of the Zeiss LSM systems. With just two
laser wavelengths and limited control over the laser function, these systems
were limited both in excitation wavelength and recording functions. The
LSM 980 confocal FLIM systems are coming with four ps diode lasers of
different wavelength [3]. The
lasers are contained in the LHB-104 Laser Hub [5], shown in Fig. 13. The
lasers are coupled into the LSM 980 scan head via a single-mode fibre by a
standard Zeiss / Lasos fibre coupler. The lasers can be switched on
an off on demand, multiplexed in time for excitation-wavelength multiplexed
FLIM, or on/off modulated for simultaneous FLIM / PLIM.
Fig. 13: LBH-104 Laser Hub. Output of four wavelengths via single fibre
with Zeiss / Lasos coupler, demonstrated by reflection off an optical grating.
Multiphoton FLIM
The bh FLIM systems work both with the
confocal versions and with the multiphoton versions of the Zeiss LSMs. The
excitation source in multiphoton systems is normally a Ti:Sa laser. The FLIM
systems are perfectly compatible with these lasers [2]. In principle, they also work with
femtosecond fibre lasers [16], should one of these be used in combination with
a Zeiss LSM.
Detectors
The bh FLIM systems for the Zeiss LSMs are
using the bh HPM-100 hybrid detectors [27]. The advantage of these detectors is
that they have a fast and clean TCSPC response (Instrument-response function, IRF),
and that they have no afterpulsing. The fast IRF and the absence of
afterpulsing background have the effect that FLIM data analysis works close to
the theoretical limit of photon efficiency [6]. Two versions of the HPM-100 are used for
FLIM. The HPM-100-40 is used in applications which require highest sensitivity
[27], the HPM-100-06 in applications which require highest time resolution [15].
Detectors and detector assemblies are compatible both with the BIG port of
confocal microscopes and with the NDD ports of multiphoton microscopes. The
detectors and detector assemblies are fully integrated in the laser-safety loop
of the LSM systems.
Fig.
14: HPM-100 hybrid detector and dual-detector assembly with adapter to the
optical ports of the Zeiss LSM systems
The bh FLIM systems also work with the
Zeiss GaAsP BIG-2 detectors [10]. The time resolution with these detectors does
not reach the resolution of the HPM detectors, but using them has the advantage
that no additional hardware has to be attached to the microscope. Additionally,
there is the bh MW FLIM detector for recording multi-spectral FLIM data. Also
this detector is available with a highly efficient GaAsP cathode [31].
SPCM Data Acquisition Software
The bh TCSPC FLIM Systems come with the
Multi SPC Software, SPCM, a software package that allows the user to operate
up to four bh TCSPC / FLIM modules. SPCM runs the data acquisition in the
various operation modes of the SPC modules while controlling peripheral
devices, such as detectors and lasers. Operation modes are available for almost
any conceivable TCSPC application, such as fluorescence and phosphorescence
decay recording, multi-wavelength decay recording, laser-wavelength
multiplexing, recording of time series, FCS and photon counting histograms,
single-, dual, or quadruple-channel FLIM, multi-wavelength FLIM, Mosaic FLIM,
time-series FLIM, Z stack FLIM, and simultaneous FLIM / PLIM. Current
bh SPCM data acquisition software includes fast online-FLIM display and online
display of decay curves in selectable regions or points of interest, see Fig. 22,
page 19. Moreover, recent SPCM versions have been upgraded with extended
multi-threading functions, avoiding bus saturation even at the highest count
rates and when computation-intensive functions like online FLIM and ROI-curve
display are used [31].
A typical SPCM user interface is shown in Fig.
15. It shows lifetime images of pig skin, recorded in different wavelength
intervals in two parallel channels of the FLIM system. The left image shows
NADH and SHG, the right image FAD.
Fig. 15: User Interface of SPCM data acquisition software. Pig skin, 2p
excitation, two wavelength channels, online lifetime display, predefined setups
for frequently used operation modes, detector control.
Fig. 16 shows a user interface
configuration for simultaneous FLIM / PLIM. From left to right, the display
windows show an NADH lifetime image, an FAD lifetime image, and an intensity
image of the phosphorescence of a Ruthenium dye.
Fig. 16: SPCM Data Acquisition Software, simultaneous FLIM / PLIM.
Left to right: NADH image, FAD image, phosphorescence image.
SPCM Integration in Zeiss ZEN Software
bh / Zeiss FLIM systems are available with
bh's new integrated SPCConnect software. It combines bh SPCM software, bh
SPCIMage NG software, and Zeiss ZEN software by a TCP (Transmission Control
Protocol). That means SPCM and SPCImage NG are running in the frame of ZEN,
with all components freely exchanging commands, system parameters, and data.
Compared to an integration on the DLL level TCP integration has the advantage
that, in addition to basic FLIM, functions like Z-stack recording, time-series
recording, fast triggered accumulation, FLITS, and simultaneous FLIM / PLIM are
included. Examples of the integrated ZEN / SPCM user interface are shown in Fig.
17 and Fig. 18.
Fig. 17: Integration of bh SPCM FLIM data acquisition and control software
in Zeiss ZEN software
Fig. 18: Z stack recording with integrated ZEN / SPCM software
SPCImage NG Data Analysis Software
The LSM 710 /780 / 880 / 980 FLIM
systems use bhs SPCImage NG next generation data analysis software [4, 32]. SPCImage NG is a combination of
time-domain [32] and phasor [57] analysis. It uses maximum-likelihood estimation
(MLE) to calculate the FLIM images, resulting in superior photon efficiency of
multi-exponential decay analysis. Image segmentation via the phasor plot allows
decay parameters to be precisely determined even in data of low photon number. Calculations
are running on a GPU (graphics-processor unit). By GPU processing, calculation
times are reduced from formerly more than 10 minutes to a few seconds. Another
novel feature is advanced modelling of the system IRF [32]. In combination with
the extraordinary timing stability of the bh FLIM system, IRF modelling makes
the recording of an IRF unnecessary. Please see [4] or [32] for details. Examples of data
analysis with SPCImage are shown in Fig. 19 and Fig. 20.
Fig. 19: SPCImage NG Data analysis software. FLIM image (left), phasor plot
(upper right), decay curve at cursor position (lower right).
Fig. 20: SPCImage NG, FRET analysis. Classic FET efficiency (left) and FRET
efficiency of interacting donor fraction (right). Both are derived from a
single lifetime image of the donor [34].
General Features of the
bh FLIM Technique
Megapixel FLIM Images
With bhs megapixel technology, pixel
numbers can be increased up to 2048 x 2048 while maintaining a
temporal resolution of 256 time channels. Alternatively, the number of time
channels can be increased up to 1024 for images of 1024x1024 pixels, and up to
4096 for images of 512x512 pixels or less. Thus, the useful pixel resolution is
rather limited by the optical resolution and the maximum field of view of the
microscope lens than by the capabilities of the bh FLIM system.
Fig. 21 shows a FLIM image of a BPAE sample
recorded at a resolution of 1024 x 1024 pixels. The image on the left
shows the entire area of the scan. The image on the right is a digital zoom
into the data shown left.
Fig. 21: Left: Image recorded with 1024 x 1024 pixels. Right:
Digital zoom into the data of Fig. 21, showing the two cells on the upper left.
Large pixel numbers are important
especially for tissue imaging. They are also useful in cases when a large
number of cells have to be investigated and the FLIM results to be compared.
Megapixel FLIM records images of many cells simultaneously, and under identical
environment conditions. Moreover, the data are analysed in a single analysis
run, with identical IRFs and fit parameters. The results are therefore exactly
comparable for all cells in the image area.
Online Display of FLIM Images and Decay Curves
SPCM data acquisition software is able to
display lifetime images and decay curves in selected spots or regions of
interest of the images. This helps the user evaluate the progress of the
recording, and, if necessary, make corrections in the laser power, the filter
settings, or select a different imaging area or a different focal plane. Please
see Fig. 22.
Fig. 22: Online display of lifetime
images (left) and online display of decay curves in selectable regions of
interest (right)
Ultra-High Efficiency
With its hybrid detectors, its
multi-dimensional TCSPC process, its high time-resolution and its highly
efficient data analysis the bh FLIM system delivers lifetime images at
near-ideal photon efficiency [6]. Typical applications are precision FLIM data
from weakly fluorescent samples, label-free imaging, and metabolic imaging by
NADH or FAD FLIM [31, 43, 49, 53, 67]. An example is shown in Fig. 23.
Fig. 23: Two-photon autofluorescence
FLIM of single cells. NADH image, excitation 750 nm, detection from 440 to
480 nm, triple-exponential fit with SPCIMage NG.
Two fully parallel TCSPC FLIM Channels
Standard bh FLIM systems record in two
wavelength intervals simultaneously. The signals are detected by separate
detectors and processed by separate TCSPC modules [31]. There is no intensity
or lifetime crosstalk. Even if one channel overloads the other channel is still
able to produce correct data.
Fig. 24: Dual-channel detection. BPAE
cells stained with Alexa 488 phalloidin and Mito Tracker Red. Left: 460 nm
to 550 nm. Right: 550 nm to 650 nm.
Multiphoton NDD FLIM: Clean Images from Deep Tissue Layers
The bh Multiphoton FLIM systems use the
non-descanned detection (NDD) path of the LSM 710/780/880/980 NLO
family microscopes. With non-descanned detection, fluorescence photons
scattered on the way out of the sample are detected far more efficiently than
in a confocal system. The result is that clear images are obtained from deep
tissue layers. An example is shown in Fig. 25. The images show a pig skin
sample exited by two-photon excitation at 800 nm. The left image shows the
wavelength channel below 480 nm. This channel contains both fluorescence
and SHG signals. The SHG fraction of the signal has been extracted from the
FLIM data and displayed by colour. The right image is from the channel
>480 nm. It contains only fluorescence, the colour corresponds to the
amplitude-weighted mean lifetime of the multi-exponential decay functions.
An often neglected advantage of multiphoton
FLIM is that it can reach fluorophores with excitation wavelengths the
ultraviolet region. It has been shown that Tryptophane can be reached by
three-photon excitation [1]. Another important example is NADH, which, by
one-photon excitation, requires 350 to 370 nm. This is, at least, an
inconvenient wavelength, where scanner optics and microscope lenses do not
perform well. With two-photon excitation, the laser wavelength is in the range
of 750 to 780 nm, which is easy to handle both for the scanner optics and
the microscope lens. For examples, please see Fig. 23 and Fig. 26.
An additional benefit of a multiphoton FLIM
system is the very fast IRF. There is virtually no contribution to the IRF from
the laser pulse itself, so that the effective IRF width is that of the detector
itself. Please see next paragraph.
Fig. 25: Two-photon FLIM of pig skin. LSM 710 NLO, HPM‑100‑40,
NDD. Left: Wavelength channel <480nm, colour shows percentage of SHG.
Right: Wavelength channel >480nm, colour shows amplitude-weighted mean
lifetime.
FLIM with Ultra-Fast Detectors
The instrument-response function of a
multiphoton FLIM system with HPM-100-06 detectors has a full-width at half
maximum (FWHM) of less than 20 ps [15, 36]. The fast response greatly
improves the accuracy at which fast decay components can be extracted from a
multi-exponential decay. Applications are mainly in the field of metabolic
FLIM, which requires separation of the decay components of bound and unbound
NADH, and in the range of FRET, which requires the separation of interacting
and non-interacting donor components. An NADH FLIM image recorded with an
ultra-fast FLIM system on a Zeiss LSM 880 NLO is shown in Fig. 25. Images
of the images of the amplitude ratio, a1/a2
(unbound/bound ratio), and of the fast (t1, unbound NADH) and the slow decay
component (t2, bound NADH) are shown in Fig. 27.
Fig. 26:
Left: NADH Lifetime image, amplitude-weighted lifetime of double-exponential
fit. Right: Decay curve in selected spot, 9x9 pixel area. FLIM data format
512x512 pixels, 1024 time channels. The IRF width is 19 ps, the
time-channel width 10ps.
Fig. 27: Left to right: Images of the
amplitude ratio, a1/a2 (unbound/bound ratio), and of the fast (t1, unbound
NADH) and the slow decay component (t2, bound NADH). FLIM data format 512x512
pixels, 1024 time channels. Time-channel width 10ps.
Fig. 28 shows mushroom spores of Cortinarius
mucosus. An image of the amplitude-weighted lifetime, tm, is shown on the
left, a decay curve on the right. tm is in the range from 20 to 40 ps, the
lifetime of the fast component, t1, in the range from 10 to 20 ps. No other
FLIM system is able to show such fast decay processes directly.
Ultra-fast decays in biological material
are more frequent than commonly believed. Similarly fast decay components were
found in other mushroom spores [44], in pollen grains [45], in natural
carotenoids [46], in human hair
[47] and in malignant melanoma [48]. Ultra-fast fluorescence decay times should
therefore no longer be put aside as a peculiarity but seriously considered as a
potential source of biological information.
Fig. 28: FLIM of Mushroom spores, Cortinarius mucosus, 2p excitation
at 760 nm. Image of the amplitude-weighted lifetime, tm, and decay curve
at cursor position. tm is in the range from 20 to 40 ps, t1 is in the
range from 10 to 20 ps.
FLIM with Tuneable Excitation Wavelength
FLIM of the same
sample at different excitation wavelength can provide additional information on
the composition of the fluorophores contained in it. Tuneable excitation is no
problem for multiphoton (NLO) systems with Ti:Sa lasers. In the past, tuneable
excitation in the visible range was provided by the Intune laser of the Zeiss
LSM 710 systems. The system delivered beautiful FLIM images with the bh
FLIM systems. Examples are shown in Fig. 29. Unfortunately, the Intune system
has been discontinued by Zeiss. There is currently no system that delivers
similar (one-photon) performance. The only system that comes close to it is the
LSM 980 confocal FLIM system with the bh Laser Hub, see Fig. 30.
Fig. 29: Confocal FLIM with tuneable Intune laser. BPAE cells stained
with Alexa 488 phalloidin and Mito Tracker Red. Amplitude weighted lifetime of
double-exponential model. Excitation at 490, 520, 535, and 556 nm, all
images 1024 x 1024 pixels.
Fig. 30: FLIM at four combinations of excitation and emission wavelength.
LSM 980 FLIM system with Laser Hub.
High Image Contrast up to the Highest Count Rates
Images taken with conventional TCSPC FLIM
at high count rate often suffer from low intensity contrast. The reason is not
the pile-up effect, as commonly believed, but intensity nonlinearity by the
dead time of the TCSPC process. bh FLIM systems using the SPC-180 or SPC-QC-104
modules do not show this effect. The SPC-180 takes the intensity information
from a fast parallel counter with almost no dead time, the SPC-QC-104 avoids
dead time by a fast time-conversion method. An image taken at an average count
rate of 6 MHz with an SPC-180NX is shown in Fig. 31. The peak count rate is
about 10 MHz. The image on the left was recorded in the traditional TCSPC
FLIM mode. Although it shows correct lifetimes it has lost almost all its
intensity contrast. The image on the right was recorded in the 'Lifetime -
Intensity' mode. It shows perfect intensity contrast.
Fig. 31: Images of a mouse kidney sample taken at an average count rate of 6 MHz.
Peak count rate is about 10 MHz. SPC-180 NX TCSPC / FLIM module.
Left: Traditional TCSPC FLIM image. Right: Lifetime / Intensity mode, intensity
from parallel counter channel.
Photon-Counting Intensity Images
A frequently asked question is whether a bh
FLIM system can record conventional intensity images. Of course it can - the
number of photons, and thus the intensity is part of the FLIM information
contained in every pixel of a lifetime image. Recent FLIM systems using SPC-180
or SPC-QC-104 TCSPC modules even deliver the intensity without
dead-time-induced nonlinearity. Intensity images can be displayed side by side
with lifetime images, see Fig. 32.
Fig. 32: Lifetime image (left) and intensity image (right), simultaneously
displayed by SPCM. SPC-180N, lifetime-intensity mode.
Time-Series FLIM
Time-series FLIM
is available for all system versions, and all detectors. The FLIM system
performs a series of recordings and saves the results into consecutive data
files. The principle is often called 'Record-and-Save' procedure. The advantage
of the record-and-save procedure is it can be used for images of large numbers
of pixels and time channels, and that the length of the series is virtually
unlimited. The disadvantage is that some time has to be provided for data readout
and data saving. This limits the speed of the sequence. In practice, the
maximum reasonable speed is about 2 images per second [69]. For faster time
series please see 'Express FLIM', page 26, and 'Temporal Mosaic FLIM', page 31.
An example for time-series FLIM by the record-and save procedure is shown in Fig.
33.
Fig. 33: Time-series FLIM, recorded into sequence of files. Acquisition
time 2 seconds per image. Chloroplasts in moss leaf, the lifetime changes due
to the Kautski effect
Fast Acquisition
The Zeiss LSMs use fast beam scanning by
galvanometer mirrors. A complete frame is scanned within a period of time from 50 ms
to a few seconds. With a scan speed as fast as this the bh FLIM systems achieve
surprisingly short acquisition times. An autofluorescence FLIM image of a live Enchytraeus
albidus is shown in Fig. 34. The acquisition time was 1.2 seconds. Considering
the high number of pixels, this is faster than what is achieved by many 'Fast
FLIM' techniques [31, 75].
Fig. 34: Lifetime image taken from a live Enchytraeus albidus.
Autofluorescence, 1.2 seconds acquisition time at 2 MHz average count rate and 50
MHz laser repetition rate. SPC‑QC‑104, 512 x 512 pixels. Online-FLIM
with SPCM software. Decay curve in selected 10x10-pixel area shown on the
right.
Recording a typical TCSPC image within a
short period of time requires an enormous data transfer rate from the TCSPC
module to the computer. The data transfer problem increases if a longer sequence
of images is to be recorded, and if several TCSPC channels are operated at high
count rate simultaneously. bh have solved the problem by a technique called
'Express FLIM'. Express FLIM does not transfer data into the computer photon by
photon. Instead, the hardware of the TCSPC module combines the information of
all photons within a given pixel into a just two numbers. One is the first
moment of the decay curve, the other the number of photons within the pixel.
Both numbers are transferred to the computer at the end of each pixel. Even for
fast scanning, the required data transfer rate can easily be achieved. The
result is a lifetime image that contains first-moment values in the individual
pixels. Express FLIM is available for all bh FLIM systems containing the
SPC-QC-104 module. An example is shown in Fig. 35.
Fig. 35: Express-FLIM of a live Enchytraeus albidus. Autofluorescence, four
subsequent images from a 5-frames/second sequence. SPC-QC-104, excitation pulse
rate 80 MHz, average photon rate about 10×106 s-1.
FCS
The bh GaAsP
hybrid detectors deliver highly efficient FCS [2, 27, 31]. Because the detectors are free
of afterpulsing diffusion times are obtained from a single detector, without
the loss in correlation events that occurs when the signals from two detectors
are cross-correlated. FCS can be obtained with the diode-laser systems, the
Intune system, and even with the multiphoton NDD systems. The bh SPCM data
acquisition software calculates FCS online and fits the data with a
user-configurable model function [31]. FCS can be recorded with picosecond
lasers or with CW lasers. With ps excitation, the FCS procedure also delivers
the decay function in the excited spot. The FCS recording can then be
time-gated to prevent Raman signals from contaminating the FCS data. An example
is shown in Fig. 36. Please see [36] or [2] for details.
Fig. 36: FCS with HPM-100-40 hybrid detector. Decay curve and FCS curve.
The first part of the decay has been suppressed by time-gating.
Fig. 37: Intensity trace recorded in
parallel with FCS.
Detection of Nanoparticles
The parameter-tag mode of the FLIM system
can also be used for single-particle detection. An example for the diffusion of
fluorescent nanoparticles through the laser focus in shown in Fig. 38.
Fig. 38: Fluorescent nanoparticles drifting through the laser focus.
Intensity trace.
The individual photon bursts can be further
analysed by bh 'SPCDynamics' software, see Fig. 39. SPCDynamics displays
fluorescence decay curves integrated over the bursts in a selected time
interval, a phasor plot of the decay data of the bursts within a selected time
interval, and decay curves and fluorescence lifetimes of individually selected
bursts.
Fig. 39:
Analysing photon bursts from single particles or single molecules by bh
'SPCDynamics' software
Precision Recording of Single Decay Curves
The DCS-120 system can record single decay
curves from fluorophore solutions or from selected spots in a two-dimensional
sample. Curves are obtained either in the 'Single' mode of SPCM, or from
summing up the decay data from a multi-pixel area within a FLIM image. This
makes a separate lifetime spectrometer for fluorophore characterisation
unnecessary. Moreover: A multiphoton system with ultra-fast detectors beats any
lifetime spectrometer in time resolution. An example is shown in Fig. 40.
Fig. 40: Fluorescence decay curve recorded with a LSM 880 NLO.
SPC-180N FLIM system with HPM-100-06 detector. Analysis by SPCImage NG.
Advanced FLIM Functions
Mosaic FLIM
Originally, bh introduced Mosaic FLIM to
record large images with the Tile Imaging function of the Zeiss laser
scanning microscopes [2, 31]. The microscope scans the sample by the TCSPC
process illustrated in Fig. 8, page 9. In addition to fast beam scanning, it
performs a raster stepping (Tile stepping) of consecutive areas of the sample
by the sample stage. For every step the sample is scanned for a defined number
of frames. For every step of the tile imaging, the TCSPC device records the
data by its normal FLIM procedure. The memory is configured to provide space
not only for a single image of the defined frame format but for the entire mosaic
of tiles. The TCSPC FLIM process starts in the first tile, or mosaic element.
After a defined number of frames the recording proceeds to the next mosaic element.
Provided the number of frames per tile of the microscope stepping and the
number of frames per mosaic elements are the same the TCSPC module records the
entire mosaic into a single photon distribution. The recorded photon distribution
represents a FLIM image of the entire mosaic. An example is shown in Fig. 41.
Fig. 41: Mosaic FLIM of a convallaria sample
The advantage of Mosaic FLIM is that a
large sample area can be imaged with a microscope lens of high NA (numerical
aperture). High NA delivers high spatial resolution and high detection
efficiency, mosaic recording delivers a large field of view, a combination that
cannot be obtained by beam scanning alone.
The idea that Mosaic FLIM records several
images into one photon distribution leads to a more general concept of Mosaic
FLIM: The transition from one mosaic element in the FLIM data to the next can
be associated also to a change in another parameter of the experiment. An
example is temporal mosaic FLIM. The sample is repeatedly scanned around the
same spatial position, but subsequent images are recorded in consecutive elements
of the FLIM mosaic. The result is a time series, the time step of which is a
multiple of the frame time [31]. An example is shown in Fig. 42.
Fig. 42: Time series acquired by mosaic
FLIM. Recorded at a speed of 1 mosaic element per second. 64 elements, each
element 128 x 128 pixels, 256 time channels, double-exponential fit
of decay data. Sequence starts at upper left. Moss leaf, lifetime changes by
non-photochemical chlorophyll transient.
Temporal Mosaic FLIM with Triggered Accumulation
Compared to conventional time-laps FLIM
temporal mosaic FLIM has several advantages: No time has to be reserved for the
save operations, and the data can be better analysed with global-parameter
fitting. The biggest advantage is, however, that mosaic time series data can be
accumulated: A sample would be stimulated repeatedly by an external event, and
the start of the mosaic recording be triggered with the stimulation. With every
new stimulation the recording procedure runs through all elements of the
mosaic, and accumulates the photons. Accumulation allows data to be recorded
without the need of trading photon number and lifetime accuracy against the
speed of the time series. Consequently, the time per step (or mosaic element)
is only limited by the minimum frame time of the scanner. With the Zeiss LSMs,
frame times (and thus time-series speeds) in the sub-50 ms range can be
obtained. The technique is not only faster than any 'Fast FLIM' technique, it
also avoids the need of excessively high excitation power and high count rate. Temporal
Mosaic FLIM is thus an excellent way to investigate fast physiological
processes in live systems [62, 61]. An example for recording Ca2+
transients in live neurons is shown in Fig. 43. Please see [31] for more
information.
Fig. 43: Ca2+ transient in cultured neurons, incubated with
Oregon Green Bapta. Electrical stimulation, stimulation period 3s, data
accumulated over 100 stimulation periods. Time per mosaic element is 38 ms.
FLITS: Fluorescence Lifetime-Transient Scanning
Triggered Temporal Mosaic FLIM records
image series at a speed of to 40 to 100 ms per image, or 10 to 25 images
per second. Dynamic effects faster than that can be recorded by bh's FLITS procedure.
FLITS records transient effects in the fluorescence lifetime of a sample along
a one-dimensional scan. The maximum resolution at which lifetime changes can be
recorded is given by the line scan time. With repetitive stimulation and triggered
accumulation transient lifetime effects can be resolved at a resolution of
about one millisecond [31, 28]. Typical applications are recording of
chlorophyll transients and Ca2+ transients in neurons or neuronal
tissue [30]. Examples are shown in Fig. 44 and Fig. 45.
Fig. 44: FLITS of chloroplasts in a
grass blade, change of fluorescence lifetime after start of illumination. Experiment
time runs bottom up. Left: Non-photochemical transient, transient resolution
60 ms. Right: Photochemical transient. Triggered accumulation,
transient-time resolution 1 ms.
Fig. 45: FLITS of Ca2+ concentration in cultured neurons. Ca2+
sensor Oregon Green, LSM 7 MP, electrical stimulation, 100 stimulation periods accumulated.
Transient-time resolution 2 ms.
Z Stack recording
Z stack recording with the bh FLIM systems
for Zeiss LSM microscopes is achieved by controlling the Z drive of the
microscope via the Zeiss ZEN software. Synchronisation with the Z scanning is obtained
by a trigger pulse from the Zeiss system to the TCSPC / FLIM modules. The FLIM
system has two procedures to record Z stacks. One is based on Mosaic FLIM: The
data of subsequent planes are recorded in a large FLIM Mosaic. An example of a
Mosaic-FLIM Z stack is shown in Fig. 46.
Fig. 46: Z stack of a pig skin sample, recorded by mosaic FLIM procedure.
The advantage of Mosaic Z stack recording
is that the images of all Z planes are recorded in a single, large FLIM data
set. This avoids delay by writing data in subsequent data sets, and guarantees
that the data of all planes are exactly comparable. It also simplifies data
analysis: The image segmentation functions of SPCImage can be applied to the entire
Z stack, and all Z planes are analysed with exactly identical fit conditions.
On the downside, the maximum number of planes is limited by the available data
space. Depending on the desired lateral resolution, that means that 16 to 64 Z
planes can be recorded.
A virtually unlimited number of Z planes
can be recorded by a 'record and save' procedure. That means an image of the
current plane is recorded, saved into a file, and then the focal plane is moved
to the next Z plane. The procedure is repeated until the desired number of
planes has been recorded. The advantage of the record-and-save procedure is
that the frame size (pixels x time channels) can be made very large, and the
number of Z planes is virtually unlimited. The disadvantage is that some time
is required to save the data of the individual planes. An example of a
high-resolution Z stack obtained from a fruit fly is shown below. The stack
contains 126 planes, each scanned with 512 x 512 pixels and 1024 time
channels. Fig. 47 shows a vertical projection of all planes in a single FLIM
image by the 'Multi-File View' of SPCM.
Fig. 47: Z
Stack of a fruit fly. Vertical projection of all 126 planes of the z stack into
a single FLIM image. Planes added by Multi-File View of SPCM, image
displayed by Online-Lifetime function of SPCM. Single-exponential lifetime by
first-moment analysis.
Fig. 48 shows the same data, analysed by
SPCImage and combined into a 3D representation by Image J. All 126 planes
were processed with a double-exponential model by the batch-processing function
of SPCImage NG, and the resulting 126 tm images written into bmp
files by the batch-export function. The bmp files were imported into Image J,
which then constructed the 3D representation.
Fig. 48: Z stack of a fruit fly. Decay analysis by SPCImage NG and 3D
reconstruction by ImageJ. Colour represents mean lifetime, tm, of
double-exponential decay, lifetime range red to blue = 0 to 1250 ps.
Simultaneous FLIM / PLIM
The bh FLIM systems are able to
simultaneously record fluorescence (FLIM) and phosphorescence lifetime images
(PLIM) [13, 31, 66, 67, 71, 91]. The technique is based on modulating a
high-frequency pulsed excitation laser synchronously with the pixel clock of
the scanner. Photon times are determined both with reference to the laser
pulses and the laser modulation period. Fluorescence is recorded during the
on time, phosphorescence during the off time of the laser. The technique
does not require a reduction of the laser repetition rate, works with
two-photon excitation and non-descanned detection, and delivers an extremely
high PLIM sensitivity. Unlike other PLIM techniques, it does not cause moiré in
the images and can thus be used at scan rates no lower than the reciprocal
phosphorescence decay time. For procedures and parameter setup in combination
with the Zeiss LSMs please see [2]. A typical result is shown in Fig. 49.
For application literature please see [31].
Fig. 49: Yeast cells stained with a Ruthenium dye. Top: NADH FLIM image and
fluorescence decay curve in selected spot. Double-exponential analysis,
metabolic indicator, a1, shown as pseudo colour. Bottom: Ruthenium PLIM image
and phosphorescence decay curve in selected spot.
Excitation-Wavelength Multiplexing
It often happens that a sample contains two
fluorophores which need to be excited at different wavelengths, either because
the excitation spectra are too different, or because the emission cannot be
cleanly separated if both are excited at the same wavelength [31]. A typical
example is metabolic FLIM by recording signals from NAD(P)H and FAD [41, 43].
In principle, images of the two fluorophores could be recorded one after
another. However, biological systems are dynamic, therefore it is desirable to
record both images simultaneously. The bh FLIM systems use
excitation-wavelength multiplexing for this task. The principle is shown in Fig.
50. Two lasers, Laser 1 and Laser 2, are multiplexed synchronously with the
pixels, lines, or frames of the scan. The TCSPC modules receive information
which of the lasers was active in the moment when a photon was detected. The
modules then build up separate FLIM images for the two lasers. With two TCSPC
modules and two detectors four images for different combinations of excitation
and emission wavelength are obtained. In practice not all of these combinations
may contain relevant data. Important is that the separation of the signals is
near-ideal. Temporal overlap of the decay functions of the fluorophores as it
occurs in pulse-by-pulse interleaved excitation does not exist.
Fig. 50: Excitation wavelength multiplexing. With two lasers and two TCSPC
channels four images for different combinations of excitation and emission
wavelength are obtained.
An example for the recording of a DAPI image
simultaneously with an Alexa 488 image is shown in Fig. 11. Two laser
wavelengths, 405 nm and 488 nm were multiplexed, and the data
recorded in two parallel TCSPC channels, as shown in Fig. 50. The two FLIM
images do no show any noticeable crosstalk in the signals of the two
fluorophores.
Fig. 51: BPAE
sample with DAPI and Alexa 488, excited by multiplexed lasers at 405 nm
(left) and 488 nm (right).
Multi-Wavelength FLIM
The principle shown in Fig. 8, page 9, can be extended to
simultaneously detect in 16 wavelength channels. The optical spectrum of the
fluorescence light is spread over an array of 16 detector channels. The TCSPC
system determines the detection times, the channel numbers in the detector
array, and the position, x, and y, of the laser spot for the individual photons.
These pieces of information are used to build up a photon distribution over the
time of the photons in the fluorescence decay, the wavelength, and the
coordinates of the image [22, 24, 31, 26]. Applications are described in [52, 53,
54, 55, 83, 84], please see [31] for more references. The principle of multi-wavelength FLIM is shown in Fig. 52.
Fig. 52: Principle of Multi-Wavelength TCSPC FLIM
As for single-wavelength FLIM, the result of the recording process
is an array of pixels. However, the pixels now contain several decay curves for
different wavelength. Each decay curve contains a large number of time
channels; the time channels contain photon numbers for consecutive times after
the excitation pulse. An example is shown in Fig. 53.
Fig. 53: Multi-wavelength FLIM of a convallaria
sample
Multiphoton Multispectral NDD FLIM
The bh multi-wavelength detector is
compatible with multiphoton excitation and non-descanned detection. It uses an
optical interface that connects to the NDD ports of the LSM 710/780/880/980 NLO
microscopes [26], see Fig. 7, page 8. A typical result is shown in Fig. 54.
Fig. 54: Multiphoton Multispectral NDD FLIM. Lifetime images and decay
curves in selected pixels and wavelength channels. LSM 710 NLO, bh MW FLIM
detector
Multispectral FLIM got a new push by the
introduction of the new PML‑16 GaAsP 16-channel detector. This detector
has five time the efficiency of the older PML‑16 detectors with conventional
cathodes. Another improvement came from bhs Megapixel FLIM technology.
Multi-spectral FLIM can now be obtained at an image size of 512 x 512
pixels in each wavelength channel while maintaining the usual 256-channel time
resolution [31].
Near-Infrared FLIM: One-Photon Excitation by Ti:Sapphire
Laser
Near-infrared (NIR) dyes are used as
fluorescence markers in small-animal imaging and in diffuse optical tomography
of the human brain. In these applications it is important to know whether the
dyes bind to proteins or other tissue constituents, and whether their
fluorescence lifetimes depend on the targets they bind to. There is also an
increasing interest in FRET donors emitting in the near infrared and in
near-infrared FRET-based molecular sensors for cell parameters. NIR FLIM is
possible by using HPM‑100-50 detectors and Ti:Sapphire laser excitation.
Different than for multiphoton FLIM, the Ti:Sapphire laser is used as a
one-photon excitation source [11, 31, 37]. The Zeiss scan head does not contain
a main dichroic beamsplitter for NIR excitation. However, it contains an 80/20
wideband beamsplitter. With the 80/20 beamsplitter FLIM images are obtained at
reasonable efficiency, please see Fig. 55. The loss of 80% of the laser power
at the beam splitter is insubstantial because the laser delivers far more power
than needed.
Fig. 55: Pig skin samples stained with 3,3-diethylthiatricarbocyanine.
Excitation at 780nm, detection 800nm to 900nm
Near-Infrared FLIM: Multiphoton Excitation with OPO
With the Zeiss LSM NLO OPO systems
near-infrared FLIM can be performed by two-photon excitation. The fluorescence
signals are detected by HPM-100-50 NIR detectors and non-descanned detection.
With two-photon excitation wavelengths in the range of 1000 to 1330 nm,
the typical NIR dyes are excited at high efficiency [12, 31, 37]. Fluorescence
is detected up to 900 nm. An example is shown in Fig. 56.
Fig. 56: Pig skin stained with
Indocyanin Green. LSM 7 OPO system, two-photon excitation at 1200 nm,
non-descanned detection, 780 to 850 nm. Depth from top of tissue
10 µm (left) and 40 µm (right). 512x512 pixels, 256 time channels.
FLIM Applications in Life
Sciences
FLIM as a Molecular Imaging Technique
When fluorescence in a sample is excited
the emission intensity depends, in first order, on the concentration of the
fluorophore and the excitation power. Intensity imaging (Fig. 57, left) is thus
an excellent way to resolve the spatial structure of a sample but it does not
tell much about the interaction of the fluorophore with its molecular
environment.
Spectral measurements or measurements in a
few spectral channels (Fig. 57, middle) are able to distinguish between
different fluorophores. However, they are not efficient in revealing changes in
the molecular environment. Such changes usually do not cause large changes in
the shape of the spectrum. Unless special fluorophores with several emission
bands are used information on molecular effects is difficult to obtain.
The situation is different for the
fluorescence lifetime. The fluorescence lifetime of a fluorophore (Fig. 57,
right), does, of course depend on the type of the fluorophore. However, within
reasonable limits, it does not depends on the concentration and the excitation
power. Instead, it changes systematically and predictably with the molecular
environment of the fluorophore. By using the fluorescence lifetime, or, more
precisely, the shape of the fluorescence decay function, molecular effects can
therefore be investigated independently of the unknown and, usually, variable
fluorophore concentration.
Fig. 57: Fluorescence. Left to right: Excitation light is absorbed by a
fluorophore, and fluorescence is emitted at a longer wavelength. The
fluorescence intensity varies with concentration. The fluorescence spectrum is
characteristic of the type of the fluorophore. The fluorescence decay function
is an indicator of interaction of the fluorophore with its molecular
environment.
Frequent FLIM applications are measurements
of the molecular environment of the fluorophores, such as pH and concentration of
biologically relevant ions, probing of protein interaction via FRET, and investigation
of the metabolic state of cell and tissues via the fluorescence lifetimes of
NADH and FAD. FLIM may also find application in plant physiology because the
fluorescence lifetime of chlorophyll changes with the photosynthesis activity.
Molecular Parameters - Derived from Fluorescence-Decay
Data
Molecular environment parameters, such as
local pH [65], ion concentrations [63, 68], local viscosity [70, 73] or redox
potential are available through TCSPC FLIM and precision decay analysis [6, 32]. With appropriate calibration of the
probe the results are quantitative, i.e. independent of the laser power, the
fluorophore concentration, the parameters of the optical-system, and other
instrumental details. Examples are shown in the figures below. Please see [72, 95]
for more applications.
Fig. 58: Lifetime image of skin tissue stained with BCECF. The lifetime is
an indicator of the pH. Right: Fluorescence decay curves in an area of low pH
(top) and high pH (bottom). LSM 510 NLO, Data Courtesy of Theodora Mauro,
University of San Francisco.
Fig. 59: FLIM image of cultured neuron stained with Oregon green OGB-1 AM.
Colour range from tm = 1200 ps (blue) to 2400 ps (red). Decay curves of regions
with low Ca (top) and high Ca (bottom) shown on the right. LSM 7 MP, Data
courtesy of Inna Slutsky and Samuel Frere, Tel Aviv University, Sackler School
of Medicine.
Fig. 60: Ca2+ transient in cultured neurons. Oregon Green Bapta,
data recorded by temporal mosaic FLIM, Mosaic FLIM with triggered accumulation,
38 ms per mosaic element. Zeiss LSM 7 MP, bh Simple-Tau 152 TCSPC FLIM
system. Data courtesy of Inna Slutsky and Samuel Frere, Tel Aviv University, Sackler
School of Medicine.
Fig. 61: Local viscosity, detected by
lifetime of BODIPY-based sensor
Fig. 62: Redox potential, detected by
lifetime of Methylen Blue
Fig. 63: Measurement of
Membrane-Potential [31, 35]. FLIM image of HEK cells loaded with a
voltage-sensitive dye, decay curve in selected 12x12 pixel area. LSM 980
with bh FLIM system and bh Laser Hub. Data courtesy of Susanna Yaeger-Weiss,
University of Berkeley
FRET - Results from a
Single Donor FLIM Image
FRET (Förster Resonance Energy Transfer) [59, 60] is used to probe
protein interaction and protein structure in biological systems. The excitation
energy is absorbed by a donor. It then transfers to an acceptor, and is emitted
via the emission band of the acceptor. The energy transfer occurs only if the
distance between the donor and the acceptor is less than a few nm. FRET is used
to obtain information about protein interaction, protein folding, and protein
structure. In principle, FRET measurements can be performed by comparing donor
intensities with and without an acceptor [79]. However, intensity-FRET
measurements are difficult to calibrate. FRET measurements are therefore mainly
performed by FLIM [23, 31, 51, 58, 80, 82]. When FRET occurs the donor is
losing energy to the acceptor, and its fluorescence lifetime becomes shorter
than for the donor alone. The decrease in the donor lifetime is then a measure
for the FRET intensity. FLIM FRET is usually considered to be inherently
quantitative. In fact, it is not, especially when it is based on simple
single-exponential 'fluorescence lifetimes' [33].
Quantitative FLIM FRET results are obtained in combination with
double-exponential FRET analysis. The method has been developed by bh already
in 2005 and has been constantly improved in the past years. The principle is
shown in Fig. 64. It is based on the fact that the fluorescence decay function
of the donor contains a component from interacting donor and from
non-interacting donor. The amplitudes and the lifetimes of the components are
determined by double-exponential decay analysis. The parameters are then used
to calculate the classic FRET efficiency, the FRET efficiency of the
interacting donor, the amount of interacting donor, and the donor-acceptor
distance. Please see [32, 34] for details.
Fig. 64: Fluorescence decay components in FRET systems
In contrast to single-exponential FRET techniques, the method
delivers correct FRET efficiencies and FRET distances even for incomplete
donor-acceptor linking, and, importantly, without the need of reference data
from a donor-only sample [31, 34].
The classic (average) FRET efficiency, the FRET efficiency of the
interacting donor, the amount of interacting donor, and the donor-acceptor
distance are displayed directly by SPCImage NG [32]. An example is shown in Fig.
65. For details and for a review of the FLIM FRET literature please see [31].
Fig. 65: FRET Measurement in life cell. Classic FRET efficiency, FRET
efficiency of interacting donor, amount of interacting donor, and ratio of
donor-acceptor distance to Förster radius. bh double-exponential FRET
technique, LSM-880 with bh picosecond diode laser and SPC-152 FLIM system, SPCImage
NG data analysis.
Metabolic Imaging by NADH FLIM
For several decades, it has been attempted
to obtain metabolic information from the fluorescence lifetime of NADH
(nicotinamide adenine dinucleotide). These attempts were not successful in
deriving the metabolic state because the lifetimes of the NADH decay components
depend also on molecular parameters other than the metabolic state. bh FLIM systems
have overcome the problem by using the ratio of bound/unbound NADH [78, 93] or
bound/unbound FAD. Because the bound and unbound forms have different
fluorescence lifetimes this ratio is represented by the amplitude ratio of the
decay components (a1/a2) or the amplitude of the fast decay component, a1. It
turns out that a1/a2 (the metabolic ratio) or a1 (the metabolic indicator)
describe the metabolic state independently of the type of the cell and its
molecular environment. In most cells and tissues, tumor cells have an a1 above
0.7, whereas normal cells have an a1 below 0.7 [43, 94]. An example is shown in
Fig. 66. For references on applications please see [31].
Fig. 66: Metabolic FLIM, a1 image and decay curves. Live human bladder
cells from a biopsy. Upper curve: Tumor cell. Lower curve: Normal cell. The
tumor cell has an a1 above 0.7. Zeiss Axio Observer with bh DC-120 scan head. Data
analysis with SPCImage NG, MLE algorithm.
NADH FLIM for Clinical Diagnostics
It has been shown that NADH FLIM can be
used for clinical diagnostics. FLIM data were obtained from human bladder cells
excised during surgery. The patients had been diagnosed with bladder cancer or
other suspicious lesions by classic endoscopy. Measurements on the excised
material were performed immediately after surgery, before the material went to
histology [94]. By using a normal / cancer discrimination threshold of
a1 = 0.71 perfect agreement with the histology results was obtained.
Please see [31, 43, 94] for details.
Personalised Chemotherapy
NADH FLIM is closely related to effect of
cancer drugs in chemotherapy [92]. Skala and Walsh used Metabolic FLIM to
evaluate the effect of different cancer drugs on cells from biopsies from
patients, and to develop the best treatment strategy [96, 97]. The cells are
cultured, the cell cultures are treated with the drugs, the cells are
repeatedly imaged by metabolic FLIM. Within a few days, the most efficient drug
can be determined and a treatment strategy for the patient be developed. If the
technique can be transferred into clinical use - which is technically easily
possible - it has the potential to revolutionise cancer treatment.
Metabolic FLIM can be applied to the investigation
of tumor progression in mammalian skin [56, 77, 85, 86, 87]. Fig. 67 and Fig. 68
show NADH images of mouse skin. Fig. 67 shows healthy skin, Fig. 68 skin from
the boarder of a tumor. Both images show the amplitude of the fast decay
component, a1. It can be seen clearly that a1 is shifted to higher values in
the tissue from the vicinity of the tumor, see histogram of a1 in the upper
right of the panels.
Fig. 67: Mouse skin, NADH image, double-exponential decay analysis,
colour-coded image of the amplitude, a1, of the fast decay component. SPC-150
FLIM system, LSM 880 NLO, two-photon excitation at 750 nm. Data analysis
with SPCImage NG.
Fig. 68: Mouse skin, NADH image, double-exponential decay analysis,
colour-coded image of the amplitude, a1, of the fast decay component. SPC-150
FLIM system, LSM 880 NLO, two-photon excitation at 750 nm. Data analysis
with SPCImage NG.
Malignant Melanoma
Malignant melanoma manifest in FLIM data by
a decay component of extremely short fluorescence lifetime and high amplitude [48].
Fig. 69 shows a lifetime image of a vertical section through malignant-melanoma
tissue. Superficial layers are shown on the right in the image, deeper layers
on the left. Colour coding shows the lifetime of the fast decay component, t1,
obtained by fitting the decay data by a triple-exponential model. Decay curves
from selected spots of the image are shown on the right. The sharp peak in the
decay curve from the superficial layer (bottom, right) shows visibly that there
must be an extremely fast decay component. The fit delivers a lifetime, t1, of
13 ps and an amplitude, a1, of 98% for this component. The amplitude
ratio, a1/(a2+a3), is about 57, which is unusually high for biological material.
The peak is not present in the decay curve from deep tissue layers, see top
right. The component lifetimes in these areas are in a more or less 'normal'
range, and compatible with a mixture of NADH, FAD, and, possibly, FMN [42]. The
parameters are t1 = 185 ps, a1 = 23.8%, a1/(a2+a3) = 0.31.
Fig. 69: Vertical section through melanoma tissue. Colour-coded image of the lifetime of the fast component, t1, of a
triple-exponential fit of the data. Red to blue corresponds to 0 to
100 ps. Decay curves in characteristic spots of the image are shown on the
right. LSM 880 NLO with SPC-150NX FLIM system, Data analysis by SPCImage NG.
For comparison, Fig. 70 shows a FLIM image
of a sample from a benign pigmented lesion. A tm image is shown on the left, a
decay curve from a selected spot on the right. As can be seen from the figure
there is no ultra-fast component of high amplitude, as in the melanoma data.
The fast decay component has a lifetime of 96 ps, and an amplitude of 45%.
This is fast, but not as fast as in the malignant melanoma. The amplitude
ratio, a1/(a2+a3), is about 0.8, i.e. 70 times smaller than for the malignant
melanoma.
Fig. 70: Left: tm image of a sample from a benign pigments skin lesion. Red
to blue corresponds to tm = 0 ps to 2500 ps. Right: decay curve in a
selected spot of the image. There is no high-amplitude ultra-fast decay
component.
Nanoparticles in Skin
An important issue in dermatology is
diffusion of drugs and nano-particles through human skin. On the one hand,
diffusion through the skin may be desirable as a pathway of drug delivery. On
the other hand, nanoparticles contained in sunscreens or cosmetic products
should not permeate through the stratum corneum of human skin. Moreover, it is
important whether the nanoparticles cause changes in their molecular
environment. The use of FLIM to study these effects has been described in [74, 81,
87]. For additional references please see [31].
TCSPC FLIM has recently been introduced in
ophthalmic scanners [31]. The instruments have produced FLIM images of amazing
quality. Clinical trials have shown that FLIM is able to detect metabolic
changes that are early indications of a number of eye diseases [64, 76, 88, 90].
Ophthalmic scanners do, however, not deliver spatial resolution at the cell
level. Clinical research has therefore to be supported by FLIM microscopy of
ex-vivo samples.
A FLIM microscopy study of extra-macular
drusen has been published by Schweitzer et al. [89]. Based on the FLIM data,
the authors were able to discriminate the RPE from Bruchs membrane, drusen,
and choroidal connective tissue. An example of a FLIM image of the RPE with
hard drusen is shown in Fig. 71. The data were acquired with the MW FLIM
multi-wavelength detector. Fig. 71 shows the lifetime data in all combined
wavelength channels. Triple-exponential decay analysis was used; the images
show the fast decay component, the medium component, and the slow decay component.
Interestingly, in the drusen and in the Bruchs membrane an extremely slow
component with about 8 ns decay time occurs. The lifetimes in the RPE are
much shorter.
Fig. 71: Autofluorescence FLIM image of a human fundus sample.
Triple-exponential analysis, left to right: Lifetimes of the fast, medium, and slow
decay component. Courtesy of Dietrich Schweitzer, Martin Hammer, Sven Peters,
Christoph Biskup, University Jena, Germany. LSM 710, bh MW FLIM detector and
SPC‑150 TCSPC module.
Spectrally resolved data are shown in Fig. 72.
It shows 6 consecutive wavelength channels of the MW FLIM detector from
450 nm to 575 nm. The lifetime shown is the amplitude weighted average
of a triple-exponential decay model. The intensities were normalised to the
brightest pixel.
Fig. 72: Lifetime images of the amplitude-weighted lifetime, tm, for single
wavelength channels from 450 nm to 575 nm. The lifetime scale is blue
to red, 0 to 2500 ps. LSM 710, bh MW FLIM detector and SPC‑150 TCSPC
module.
Summary
The bh FLIM systems for Zeiss LSM
710/780/880/980 laser scanning microscopes are high-performance lifetime
imaging system based on laser scanning and multi-dimensional TCSPC. The systems
are characterised by high time resolution, high sensitivity, high photon
efficiency, fast acquisition, high spatial resolution, and suppression of
out-of-focus fluorescence and laterally and longitudinally scattered light. bh
FLIM systems can be used for the entire range from entry level FLIM to high-end
multidimensional molecular imaging applications.
Different than other FLIM techniques and
FLIM systems which consider FLIM just a way to improve contrast in laser
scanning microscopy, the bh FLIM systems have strictly been designed with
molecular-imaging applications in mind. The systems thus have capabilities
beyond the reach of other systems: Compatibility with live-cell imaging,
extraordinarily high time resolution and photon efficiency, improved capability
to split decay functions into several components, excitation-wavelength
multiplexing in combination with parallel-channel detection, recording of
dynamic lifetime changes, and simultaneous FLIM/PLIM. Typical applications are
measurements of molecular-environment parameters, protein-interaction
experiments by FRET techniques, label-free imaging, imaging of the metabolic
state of cells and tissues, the use of endogenous fluorophores with lifetimes
in the 10-ps range, oxygen-concentration measurement, and recording of fast
physiological processes in biological systems. No other FLIM technique and no
other FLIM system offers a similar range of capabilities.
1.
S. R. Alam, H. Wallrabe, Z. Svindrych, A. K.
Chaudhary, K. G. Christopher, D. Chandra, A. Periasamy, Investigation of
Mitochondrial Metabolic Response to Doxorubicin in Prostate Cancer Cells: An
NADH, FAD and Tryptophan FLIM Assay. Scientific Reports 7 (2017)
2.
Becker & Hickl GmbH, Modular FLIM
systems for Zeiss LSM 710/780/880 family laser scanning microscopes. User
handbook, 8th ed., available on www.becker-hickl.com,
please contact bh for printed copies
3. Becker & Hickl GmbH, FLIM systems for Zeiss LSM 980.
Addendum to handbook for modular FLIM systems for Zeiss LSM 710/780/880
family laser scanning microscopes 7th ed., available on www.becker-hickl.com,
please contact bh for printed copies
4. Becker & Hickl GmbH, SPCImage NG Next Generation FLIM data
analysis software. Overview brochure, 28 pages, available on
www.becker-hickl.com.
5. Becker &
Hickl GmbH, LHB-104 Laser Hub. User manual, available on
www.becker-hickl.com.
6. W. Becker, Bigger and Better Photons: The Road to Great FLIM
Results. Available on www.becker-hickl.com.
7.
Becker & Hickl GmbH, Becker & Hickl
GmbH, Megapixel FLIM with bh TCSPC Modules - The New SPCM 64-bit Software.
Application note, available on www.becker-hickl.com
8.
Becker & Hickl GmbH, FLIM with NIR Dyes. Application note, available on www.becker-hickl.com
9. Becker & Hickl GmbH, Multiphoton NDD FLIM at NIR Detection
Wavelengths with the Zeiss LSM 7MP and OPO Excitation. Application note,
available on www.becker-hickl.com
10. Becker & Hickl GmbH, Zeiss BiG‑2 GaAsP Detector is
Compatible with bh FLIM Systems. Application note, available on
www.becker-hickl.com
11. Becker & Hickl GmbH, FLIM with NIR Dyes. Application note,
available on www.becker-hickl.com
12. Becker & Hickl GmbH, Multiphoton NDD FLIM at NIR Detection
Wavelengths with the Zeiss LSM 7MP and OPO Excitation. Application note,
available on www.becker-hickl.com
13. Becker & Hickl GmbH, Simultaneous Phosphorescence and
Fluorescence Lifetime Imaging by Multi-Dimensional TCSPC and Multi-Pulse
Excitation. Application note, available on www.becker-hickl.com
14. Becker & Hickl GmbH, New SPCImage Version Combines Time-Domain
Analysis with Phasor Plot. Application note, available on www.becker-hickl.com
15. Becker & Hickl GmbH, Sub-20ps IRF Width from Hybrid Detectors
and MCP-PMTs. Application note, available on www.becker-hickl.com
16. W. Becker, C. Junghans, L. Braun, A. Jelzow, Two-Photon FLIM with a
Small Femtosecond Fibre Laser. Application note, available on
www.becker-hickl.com
17. Becker & Hickl GmbH, SPCM Software Runs Online-FLIM at 10 Images
per Second. Application note, available on www.becker-hickl.com
18. Fast-Acquisition TCSPC FLIM System with sub-25 ps IRF width.
Application note, available from www.becker-hickl.com
19. Fast-Acquisition Multiphoton FLIM with the Zeiss LSM 880 NLO.
Application note, available from www.becker-hickl.com
20. Fast-Acquisition TCSPC FLIM: What are the Options? Application note,
available from www.becker-hickl.com
21. W. Becker, K. Benndorf, A. Bergmann, C. Biskup, K. König, U.
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28. W. Becker, B. Su, A. Bergmann, Spatially resolved recording of
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32. W. Becker, SPCImage Data analysis software. In: W. Becker, The bh
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33. W. Becker, A Common Mistake in Lifetime-Based FRET Measurements.
Application note, Becker & Hickl GmbH (2023)
34. W. Becker, A. Bergmann, Double-Exponential FLIM-FRET Approach is
Free of Calibration. Application note, Becker & Hickl GmbH (2023)
35. W. Becker, A. Bergmann, Measurement of
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on www.becker-hickl.com
36. W. Becker, The bh TCSPC Technique. Principles and Applications.
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37. W. Becker, V. Shcheslavskiy, Fluorescence Lifetime Imaging with
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38. W. Becker (ed.), Advanced time-correlated single photon counting
applications. Springer, Berlin, Heidelberg, New York (2015)
39. W. Becker, Introduction to Multi-Dimensional TCSPC.
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41. W. Becker, A. Bergmann, L. Braun, Metabolic Imaging with the DCS-120
Confocal FLIM System: Simultaneous FLIM of NAD(P)H and FAD, Application note,
Becker & Hickl GmbH (2019)
42. W. Becker, L. Braun, DCS-120 FLIM System Detects FMN in Live Cells,
application note, available on www.becker-hickl.com.
43. Becker Wolfgang, Suarez-Ibarrola Rodrigo, Miernik Arkadiusz, Braun
Lukas, Metabolic Imaging by Simultaneous FLIM of NAD(P)H and FAD. Current
Directions in Biomedical Engineering 5(1), 1-3 (2019)
44. W. Becker, C. Junghans, A. Bergmann, Two-Photon FLIM of Mushroom
Spores Reveals Ultra-Fast Decay Component. Application note, available on
www.becker-hickl.com.
45. W. Becker, T. Saeb-Gilani, C. Junghans, Two-Photon FLIM of Pollen
Grains Reveals Ultra-Fast Decay Component. Application note, available on
www.becker-hickl.com
46. W. Becker, A. Bergmann, C. Junghans, Ultra-Fast Fluorescence Decay
in Natural Carotenoids. Application note, www. becker-hickl.com (2022)
47. W. Becker, C. Junghans, V. Shcheslavskiy, High-Resolution
Multiphoton FLIM Reveals Ultra-Fast Fluorescence Decay in Human Hair.
Application note, www. becker-hickl.com (2023)
48. W. Becker,V. Shcheslavskiy, V. Elagin, Ultra-Fast Fluorescence Decay
in Malignant Melanoma. Application note, available on www. becker-hickl.com
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counting for Simultaneous monitoring of zinc oxide nanoparticles and NAD(P)H in
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89. D. Schweitzer, E.R. Gaillard, J. Dillon, R.F. Mullins, S. Russell,
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Specifications
General
Principle
Lifetime measurement time-domain
Excitation high-frequency
pulsed lasers
Buildup of lifetime images Single-photon
detection by multi-dimensional TCSPC [31]
Builds
up distribution of photons over photon arrival time
after
laser pulses, scan coordinates,
time
from laser modulation, time from start of experiment.
Multi-wavelength FLIM uses
wavelength of photons as additional coordinate of photon distribution
Excitation wavelength multiplexing uses
laser number as additional coordinate of photon distribution
Scan rate works
at any scan rate
Buildup of fluorescence correlation
data correlation of absolute photon times [31]
General operation modes FLIM,
two spectral or polarisation channels
Multi-wavelength
FLIM
Time-series
FLIM, microscope-controlled time series
Z-Stack
FLIM
Mosaic
FLIM, x,y, z, temporal
Excitation-wavelength
multiplexed FLIM
FLITS
(fluorescence lifetime-transient scanning)
PLIM
(phosphorescence lifetime imaging) simultaneous with FLIM
FCS,
cross FCS, gated FCS, PCH
Single-point
fluorescence decay recording
Data
recording hardware, please see [31] for
details
TCSPC System SPC-150NX
or SPC-180NX TCSPC / FLIM modules
Number of parallel TCSPC / FLIM channels typ.
2, min. 1, max 4
Number of detector (routing) channels
in FLIM modes 16 for each FLIM channel
Principle Advanced
TAC/ADC principle
Electrical time resolution 1.63 ps
rms / 3.5 ps fwhm
Minimum time channel width 405
fs
Timing stability over 30 minutes typ.
better than 5ps
Dead time SPC-150NX:
100 ns / SPC-180NX: 80 ns
Saturated count rate 10
MHZ / 12 MHz per channel
Dual-time-base operation via
micro times from TAC and via macro time clock
Source of macro time clock internal
40MHz clock or from laser
Input from detector constant-fraction
discriminator
Reference (SYNC) input constant-fraction
discriminator
Synchronisation with scanning via
frame clock, line clock and pixel clock pulses
Scan rate any
scan rate
Synchronisation with laser
multiplexing via routing
function
Recording of multi-wavelength data simultaneous
in 16 channels, via routing function
Experiment trigger function TTL,
used for Z stack FLIM and microscope-controlled time series
Basic acquisition principles on-board-buildup
of photon distributions
buildup
of photon distributions in computer memory
generation
of parameter-tagged single-photon data
online
auto or cross correlation and PCH
Operation modes f(t),
oscilloscope, f(txy), f(t,T), f(t) continuous flow
FIFO
(correlation / FCS / MCS) mode
Scan
Sync In imaging, Scan Sync In with continuous flow
FIFO
imaging, with MCS imaging, mosaic imaging, time-series imaging
Multi-detector
operation, laser multiplexing operation
cycle
and repeat function, autosave function
Max. Image size, pixels (SPCM 64 bit software) 4096x4096 2048x2048 512x512 256x256
No of time channels, see [31] 64 256 1024 4096
Data
Acquisition Software, please see [31]
for details
Operating system Windows
10, 64 bit
Loading of system configuration single
click in predefined setup panel
Start / stop of measurement by
operator or by timer, starts with start of scan, stops with end of frame
Online calculation and display, FLIM,
PLIM in intervals of Display Time, min. 1 second
Online calculation and display, FCS,
PCH in intervals of Display Time, min. 1 second
Number of images displayed
simultaneously max 8
Number of curves (Decay, FCS, PCH,
Multiscaler) 8 in one curve window
Cycle, repeat, autosave functions user-defined,
used for
for
time-series recording, Z stack FLIM,
microscope-controlled
time series
Saving of measurement data User
command or autosave function
Optional
saving of parameter-tagged single-photon data
Link to SPCImage data analysis automatically
after end of measurement or by user command
Data
Analysis: bh SPCImage, integrated in bh TCSPC package, see [2] or [31]
Data types processed FLIM,
Lif/Int FLIM, PLIM, MW FLIM, Mosaic FLIM, time-series, Z stacks, single curves
Procedures WLS,
MLE or first-moment calculation
GPU Processing MLE,
if GPU is present
Extra Hardware NVIDIA
GPU, optional
IRF Synthetic
IRF or measured IRF
Model functions Single,
double, triple exponential decay
Single,
double, triple exponential incomplete decay models
Shifted-component
model
Parameters displayed Amplitude-
or intensity-weighted average of component lifetimes
Component
lifetimes, component amplitudes, ratios of lifetimes or amplitudes
Classic
and interacting-donor FRET efficiency, donor-acceptor distance
Fractional
intensities of components or ratios of fractional intensities
Parameter
distributions
Phasor Plot Available
for all types of FLIM data
Parameter histograms, one-dimensional Pixel
frequency over any decay parameter or ratio of decay parameters
Parameter histograms, two-dimensional Pixel
frequency over two decay parameters, Phasor plot
ROI definition Polygon
or rectangle
Image segmentation Via
Phasor Plot or 2D Histograms
Excitation
Sources, One-Photon Excitation, please see [2] for details
Picosecond Diode Lasers, LSM
710...880
Number of lasers 1
or 2
Configuration Modified
bh BDL-SMC lasers, Integrated in LSM System
Wavelengths 405nm,
445nm
Mode of operation picosecond
pulses or CW
Pulse width, typical 40
to 100 ps
Pulse frequency selectable,
20MHz, 50MHz, 80MHz
Power in picosecond mode 0.4mW
to 1mW at fibre output. Depends on wavelength version.
Power in CW mode 20
to 40mW at fibre output. Depends on wavelength version.
Picosecond Diode Lasers, LSM 980
Number of lasers 4
Available Wavelengths 375nm,
405nm, 445nm, 473nm, 488nm, 515nm, 640nm, 685nm, 785nm
Configuration 4
bh BDL-SMC lasers in LHB-104 laser module, single fibre output
Mode of operation Picosecond
pulses or CW
Pulse width, typical 40
to 100 ps
Pulse frequency Selectable,
20MHz, 50MHz, 80MHz
Power in picosecond mode 0.2mW
to 1mW at fibre output. Depends on wavelength version.
Power in CW mode 20
to 40mW at fibre output. Depends on wavelength version.
Lasers Multiplexing
LSM 710..880, integrated ps diode
lasers Multiplexing not available
LSM 980, diode lasers in bh LHB-104
Laser Hub Frame, Line, Pixel
Laser Modulation for PLIM
Multiphoton (NLO) systems Requires
bh DDG-210 card and Zeiss PLIM indimo
Diode Lasers, LSM 710..880 not
available
Diode Lasers, LSM 980 By
electronics of LHB-104 Laser Hub
Excitation
Sources, Multi-Photon Excitation, please see [2] for details
Femtosecond NIR Lasers any
femtosecond Ti:Sa laser or Ti:Sa pumped OPO
Wavelength 650
to 1000
Repetition rate typ.
80 MHz
Laser Modulation for PLIM requires
bh DDG-210 card and Zeiss PLIM indimo
Detectors
Interface to LSM family microscopes NDD
or BIG adapter
Beamsplitter, NDD port Zeiss
NDD T Adapter
Beamsplitter, confocal port bh
beamsplitter assembly with Zeiss-type filter cubes
detectors
are portable between NDD and (confocal) BIG port
Hybrid Detectors (standard) bh
HPM-100-40 hybrid detector
Spectral Range 300
to 710nm
Peak quantum efficiency 40
to 50%
IRF width (fwhm) 120
to 130 ps
Detector area 3mm
Background count rate, thermal 300
to 2000 counts per second
Background from afterpulsing not
detectable
Afterpulsing peak in FCS not
detectable
Power supply and overload shutdown via
DCC-100 or DCU-400/800 controller of TCSPC system
Hybrid Detectors (ultra-fast,
optional) bh
HPM-100-06 and -07 hybrid detector
Spectral Range -06:
300 to 600nm -07: 300 to 750nm
Peak quantum efficiency 20
%
IRF width (fwhm, with Ti:Sa laser) 19 ps
Detector area 3mm
Background count rate, thermal 100
to 500 counts per second
Background from afterpulsing not
detectable
Power supply, gain control, overload
shutdown via DCC-100 or DCU-400/800 controller of TCSPC system
Hybrid Detectors for NIR (optional) bh HPM-100-50 hybrid
detector
Spectral Range 400
to 900nm
Peak quantum efficiency 12
to 15%
IRF width (fwhm) 130
to 160 ps
Detector area 3mm
Background count rate, thermal 1000
to 8000 counts per second
Background from afterpulsing not
detectable
Power supply, gain control, overload
shutdown via DCC-100 or DCU-400/800 controller of TCSPC system
Multi-Wavelength FLIM
Detector (optional) bh MW FLIM assembly
Spectral range 380
to 630nm or 380 to 750nm
Number of wavelength channels 16
Spectral width of wavelength channels 12.5
nm
IRF width (fwhm) 250
ps
Power supply, gain control, overload
shutdown via DCC-100 or DCU-400/800 controller of TCSPC system
Zeiss BIG-2 Detector
IRF width (fwhm, with Ti:Sa laser) 250
ps
Electrical connection Via
bh A-PPI-D adapter
Power supply, gain control and
overload shutdown via LSM / ZEN hardware / software
Other specifications please
see [10]